[Exclamation "!" mark on Wireless icon]

It is how Window's displays the fact that you are connected to a network without encryption. There would be no way to change it without having to patch each machine that's connected to the network.

The pineapple is a open wireless network, because encryption would not allow the clients to connect, because they do not know the key.

[Ending ssh, but leave program running?]

You could open a screen session and run reaver in it.

screen -S 'name_of your_session' - Starts a session with that name.

You would run reaver and hit Ctrl+a+d to detach from the session, this will run even when you are logged out.

To resume the session, just use the command: screen -r 'name_of_your_session'.

For more information on the screen command, here is the manpage: http://www.gnu.org/software/screen/manual/screen.html

[How do i get Karma to work on wlan2?]

As far as I know, only the atheros drivers are patched to allow Karma, any other chipsets won't work with Karma.

[Install to SD card no longer an option in the Pineapple Bar]

No Problem

[Install to SD card no longer an option in the Pineapple Bar]

Found this in your log:

00:00:37 Pineapple kern.info kernel: [ 11.900000] sda: unknown partition table

Looks like you need to format the SD card.

If you click on the resources tile, there is an option to do it there.

[Mk4 - Scp Troubles]

You can also install openssh sftp server, which will work alongside dropbear.

The package is called: openssh-sftp-server. Installing this should allow you to use winscp.

You can't install it on usb storage though, tried it before and it only worked when installed on internal memory.